HORDB

ID: hor002717
Uniprot ID: F5XVF1
Protein name: Ci-LF-2
Gene name: ci-lf
Organism: Ciona intestinalis (Transparent sea squirt) (Ascidia intestinalis)
Family: NA
Source: animal
Expression: NA
Disease: NA
Comments: NA
Taxonomy: Ciona (genus), Cionidae (family), Phlebobranchia (order), Ascidiacea (class), Tunicata (subphylum), Chordata (phylum), Deuterostomia, Bilateria, Eumetazoa, Metazoa (kingdom), Opisthokonta, Eukaryota (superkingdom), cellular organisms
GO MF: NA
GO BP: NA
GO CC: NA

Sequence: YPGFQGLF
Length: 8(132-139)
Propeptide: MKLVKSFSILAAFVVCYFGCIADAVPVDTVEKQLLRREGTGNPENFLDWTNQLNSTDVDEPDEELYDQLLYNILIPMQQKMIAEENGQLDNAEDNPFLAENRNSDEENNDYSPGQAESIQSDKRFQSLFKRYPGFQGLFKRHNPHLPDLFKRYNSMGLFKRSPGMLGLFKRGLLGLFKRSDARLQGLFKRDSATQGSFKRSSEAQALPKRYPNFQGLFKRLSEATEYPEDDSSNDDTKQRGNLHSLFKRDTSAHY
Signal peptide: MKLVKSFSILAAFVVCYFGCIADA
Modification: NA
Glycosylation: NA
Mutagenesis: NA

Function: NA
Mechanism: The sequence shown here is derived from an EMBL/GenBank/DDBJ third party annotation (TPA) entry.
Cross BBB: NA
Target: NA
Target Unid: NA
IC50: NA
EC50: NA
ED50: NA
kd: NA
Half life: NA

Structure: (PDB_ID-from https://www.rcsb.org/; AlphaFold_DB_ID-from https://alphafold.ebi.ac.uk/; hordbxxxxxx_AF2.pdb was predicted structure by AlphaFold2; hordbxxxxxx_ESM.pdb was predicted structure by ESMFold)

hor002717_AF2.pdb

hor002717_ESM.pdb

Mass:	105309	Formula:	C47H61N9O11
Absent amino acids:	ACDEHIKMNRSTVW	Common amino acids:	FG
pI:	6.09	Basic residues:	0
Polar residues:	3	Hydrophobic residues:	3
Hydrophobicity:	27.5	Boman Index:	708
Half-Life:	2.8 hour	Half-Life Yeast:	10 min
Half-Life E.Coli:	2 min	Aliphatic Index	48.75
Instability Index:	2417.5	Extinction Coefficient cystines:	1490
Absorbance 280nm:	212.86

PubMed ID: 21467196
Title: Peptidomic Analysis of the Central Nervous System of the Protochordate, Ciona Intestinalis: Homologs and Prototypes of Vertebrate Peptides and Novel Peptides